Perhaps it depends how bad the original battery was before the change, or just didn't give it enough time to recalibrate, no doubt there are variations in BMS version depending on model year also? (my start/stop worked ok)
I've had a BM2 battery monitor fitted for a few years now and I've noticed that every so often the alternator allows the battery voltage to drop lower than usual before recharging. It's my opinion (which could be entirely wrong

) that this is the BMS checking/calibrating for the battery condition, which is obviously going to slowly deteriorate with time.